ModCRE DB

Transcription factor

P23759 - PAX7

Paired box protein Pax-7 (HuP1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 505 aa

18 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known18
MotifPredictionSourceDNA bindingSupportLogoActions
MA0680.1 Known JASPAR TAATCGATTA Direct PWM Open · Scan
M00345_2.00 Known CisBP TCGTCACGGT Direct PWM Open · Scan
M00346_2.00 Known CisBP CGTCACGGTT Direct PWM Open · Scan
M03292_2.00 Known CisBP TAATCGATTA Direct PWM Open · Scan
M03293_2.00 Known CisBP TAATCGATTA Direct PWM Open · Scan
M05416_2.00 Known CisBP GACCGTGACGAATCG Direct PWM Open · Scan
M05417_2.00 Known CisBP TCGTCACGCTTATTAA Direct PWM Open · Scan
M05418_2.00 Known CisBP GTAATCAATTAC Direct PWM Open · Scan
M05419_2.00 Known CisBP CGATTAGTCACGGTT Direct PWM Open · Scan
M05420_2.00 Known CisBP TCGTCACGGTTATTAA Direct PWM Open · Scan
M05421_2.00 Known CisBP ATAATCAATTAT Direct PWM Open · Scan
M05422_2.00 Known CisBP CGATTCGTCACGGTT Direct PWM Open · Scan
M05423_2.00 Known CisBP TCGTCACGCTTATTAG Direct PWM Open · Scan
M05424_2.00 Known CisBP ATAATCGATTAT Direct PWM Open · Scan
M05425_2.00 Known CisBP CGATTAGTCACGCTT Direct PWM Open · Scan
M05426_2.00 Known CisBP TCGTCACGCTTATTAA Direct PWM Open · Scan
M05427_2.00 Known CisBP ATAATTGATTAT Direct PWM Open · Scan
M05874_2.00 Known CisBP ATTAGTCACGGTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 505 aa
216-275

Region 216-275 0 PWM

Residues
60 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 216-2751 model
Actions
Predicted = Low DIMER_P23759:216:275_1fjl_A_1 1fjl 216-275 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
34-161PF00292'Paired box' domainNo overlap with loaded model regions
218-274PF00046Homeodomainoverlaps 216-275
346-385PF12360Paired box protein 7No overlap with loaded model regions