ModCRE DB

Transcription factor

P23769 - GATA2

Endothelial transcription factor GATA-2 (GATA-binding protein 2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 480 aa

18 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known18
MotifPredictionSourceDNA bindingSupportLogoActions
MA0036.1 Known JASPAR GGATA Direct PWM Open · Scan
MA0036.2 Known JASPAR AGATTCTTATCTGT Direct PWM Open · Scan
MA0036.3 Known JASPAR TTCTTATCTTT Direct PWM Open · Scan
MA0036.4 Known JASPAR CTTATCT Direct PWM Open · Scan
M04879_2.00 Known CisBP GCGATAACG Direct PWM Open · Scan
M04880_2.00 Known CisBP GAGATAACG Direct PWM Open · Scan
M07966_2.00 Known CisBP ACAGATAAGAA Direct PWM Open · Scan
M07967_2.00 Known CisBP TGGGGGGGGCAGATAAGG Direct PWM Open · Scan
M07968_2.00 Known CisBP CTGGTGGGGGCAGATAAG Direct PWM Open · Scan
M07969_2.00 Known CisBP ACAGATAAGA Direct PWM Open · Scan
M07970_2.00 Known CisBP CAGATAAGAA Direct PWM Open · Scan
M08125_2.00 Known CisBP AAAGATAAGAA Direct PWM Open · Scan
M09119_2.00 Known CisBP CTGGGGGGTGGAGATAAGG Direct PWM Open · Scan
M09550_2.00 Known CisBP GAGATAAGGA Direct PWM Open · Scan
M10594_2.00 Known CisBP GCGGATAGCG Direct PWM Open · Scan
M10595_2.00 Known CisBP AGAGATAAGA Direct PWM Open · Scan
M10596_2.00 Known CisBP AGAGATAAGA Direct PWM Open · Scan
GATA2_HUMAN.H11MO.0.A Known HOCOMOCO CTGGGGGGTGGAGATAAGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 480 aa
388-432

Region 388-432 0 PWM

Residues
45 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB
Templates
5T01
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 388-4321 model
Actions
Predicted = Low DIMER_P23769:388:432_5t01_B_1 5t01 388-432 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
295-328PF00320GATA zinc fingerNo overlap with loaded model regions
349-382PF00320GATA zinc fingerNo overlap with loaded model regions