ModCRE DB

Transcription factor

P25208 - NFYB

Nuclear transcription factor Y subunit beta (CAAT box DNA-binding protein subunit B) (Nuclear transcription factor Y subunit B) (NF-YB)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 207 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA0502.1 Known JASPAR AAATGGACCAATCAG Direct PWM Open · Scan
MA0502.2 Known JASPAR CTCATTGGCCAG Direct PWM Open · Scan
MA0502.3 Known JASPAR TCATTGGCC Direct PWM Open · Scan
M08178_2.00 Known CisBP AAATGGACCAATCAG Direct PWM Open · Scan
M09444_2.00 Known CisBP CAGCCAATCAGAG Direct PWM Open · Scan
NFYB_HUMAN.H11MO.0.A Known HOCOMOCO CAGCCAATCAGAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 207 aa
52-143

Region 52-143 0 PWM

Residues
92 aa
Domains
PF00808 · Histone-like transcription factor (CBF/NF-Y) and archaeal histone
3D models
1 active PDB
Templates
4AWL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 52-1431 model
Actions
Predicted = Low TFS_P25208:52:143_4awl_B_1 4awl 52-143 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
58-122PF00808Histone-like transcription factor (CBF/NF-Y) and archaeal histoneoverlaps 52-143