ModCRE DB

Transcription factor

P27540 - ARNT

Aryl hydrocarbon receptor nuclear translocator (ARNT protein) (Class E basic helix-loop-helix protein 2) (bHLHe2) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1-beta) (HIF-1-beta) (HIF1-beta)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 789 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0259.1 Known JASPAR GGACGTGC Direct PWM Open · Scan
MA0259.2 Known JASPAR ACGTG Direct PWM Open · Scan
M08732_2.00 Known CisBP GTACGTGCC Direct PWM Open · Scan
M09459_2.00 Known CisBP GCACGTAT Direct PWM Open · Scan
M09863_2.00 Known CisBP GCGAGCACGTGACAAC Direct PWM Open · Scan
M09864_2.00 Known CisBP CAAAGGTCACGTGACCTTTG Direct PWM Open · Scan
ARNT_HUMAN.H11MO.0.B Known HOCOMOCO GTACGTGCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 789 aa
77-148

Region 77-148 0 PWM

Residues
72 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1HLO
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 77-1481 model
Actions
Predicted = Low DIMER_P27540:77:148_1hlo_A_1 1hlo 77-148 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
91-143PF00010Helix-loop-helix DNA-binding domainoverlaps 77-148
166-269PF00989PAS foldNo overlap with loaded model regions
362-465PF14598PAS domainNo overlap with loaded model regions