ModCRE DB

Transcription factor

P28069 - POU1F1

Pituitary-specific positive transcription factor 1 (PIT-1) (Growth hormone factor 1) (GHF-1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 291 aa

12 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known12
MotifPredictionSourceDNA bindingSupportLogoActions
MA0784.1 Known JASPAR AATATGCAAATTAG Direct PWM Open · Scan
MA0784.2 Known JASPAR AGCTAATTTGCATAAT Direct PWM Open · Scan
MA0784.3 Known JASPAR CTAATTTGCATAAT Direct PWM Open · Scan
M03300_2.00 Known CisBP CTCATGCATAATTAATG Direct PWM Open · Scan
M03301_2.00 Known CisBP AATATGCAAATTAG Direct PWM Open · Scan
M05453_2.00 Known CisBP TTAATGAGATGCAT Direct PWM Open · Scan
M05454_2.00 Known CisBP ATGCATAAATTAA Direct PWM Open · Scan
M05455_2.00 Known CisBP TTATGCAAATGAGG Direct PWM Open · Scan
M05456_2.00 Known CisBP TTAATGAGATGCGT Direct PWM Open · Scan
M05457_2.00 Known CisBP ACGCATAAATTAA Direct PWM Open · Scan
M05458_2.00 Known CisBP ATATGCAAATTAGC Direct PWM Open · Scan
PIT1_HUMAN.H11MO.0.C Known HOCOMOCO CTCATGAATATAT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 291 aa
125-273

Region 125-273 0 PWM

Residues
149 aa
Domains
PF00157 · Pou domain - N-terminal to homeobox domain PF00046 · Homeodomain
3D models
1 active PDB
Templates
5WC9
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 125-2731 model
Actions
Predicted = Low DIMER_P28069:125:273_5wc9_A_1 5wc9 125-273 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
129-198PF00157Pou domain - N-terminal to homeobox domainoverlaps 125-273
215-271PF00046Homeodomainoverlaps 125-273