ModCRE DB

Transcription factor

P28358 - HOXD10

Homeobox protein Hox-D10 (Homeobox protein Hox-4D) (Homeobox protein Hox-4E)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 340 aa

10 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known10
MotifPredictionSourceDNA bindingSupportLogoActions
MA1506.1 Known JASPAR GGTCGTAAAAC Direct PWM Open · Scan
MA1506.2 Known JASPAR GGTCGTAAAA Direct PWM Open · Scan
M05112_2.00 Known CisBP GTTTTATTGC Direct PWM Open · Scan
M05113_2.00 Known CisBP GTCGTAAAAC Direct PWM Open · Scan
M05114_2.00 Known CisBP GTTTTATTAC Direct PWM Open · Scan
M05115_2.00 Known CisBP GTCGTAAAAC Direct PWM Open · Scan
M05116_2.00 Known CisBP GGTCGTAAAAC Direct PWM Open · Scan
M05117_2.00 Known CisBP GGTAATAAAAA Direct PWM Open · Scan
M05118_2.00 Known CisBP GGTCGTAAAAT Direct PWM Open · Scan
M05119_2.00 Known CisBP GGTAATAAAAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 340 aa
260-323

Region 260-323 0 PWM

Residues
64 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
5ZJS
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 260-3231 model
Actions
Predicted = Low DIMER_P28358:260:323_5zjs_A_1 5zjs 260-323 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
267-323PF00046Homeodomainoverlaps 260-323