Region 170-631 0 PWM
- Residues
- 462 aa
- Domains
- PF00176 · SNF2-related domain PF00271 · Helicase conserved C-terminal domain
- 3D models
- 1 active PDB
- Templates
- 5O9G
- Sources
- Structure model
Transcription factor
P28370 - SMARCA1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 (SMARCA1) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin A1) (EC 3.6.4.-) (Global transcription activator SNF2L1) (Nucleosome-remodeling factor subunit SNF2L) (SNF2L) (SNF2 related chromatin remodeling ATPase 1)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1042 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| SMCA1_HUMAN.H11MO.0.C | Known | HOCOMOCO | CCAAGAAGAATG | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
1042 aa
170-631
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 170-6311 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_P28370:170:631_5o9g_W_1 | 5o9g | 170-631 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 186-465 | PF00176 | SNF2-related domain | overlaps 170-631 |
| 487-600 | PF00271 | Helicase conserved C-terminal domain | overlaps 170-631 |
| 746-844 | PF09110 | HAND | No overlap with loaded model regions |
| 901-1014 | PF09111 | SLIDE | No overlap with loaded model regions |