ModCRE DB

Transcription factor

P28698 - MZF1

Myeloid zinc finger 1 (MZF-1) (Zinc finger and SCAN domain-containing protein 6) (Zinc finger protein 42)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 734 aa

11 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known11
MotifPredictionSourceDNA bindingSupportLogoActions
MA0056.1 Known JASPAR TGGGGA Direct PWM Open · Scan
MA0056.2 Known JASPAR CAAATCCCCACTT Direct PWM Open · Scan
MA0056.3 Known JASPAR AATCCCCA Direct PWM Open · Scan
M02663_2.00 Known CisBP TCCCCA Direct PWM Open · Scan
M02664_2.00 Known CisBP TTCCCCCTAC Direct PWM Open · Scan
M08236_2.00 Known CisBP CCATTTT Direct PWM Open · Scan
M08286_2.00 Known CisBP CAAAATGGCTGCCCC Direct PWM Open · Scan
M08863_2.00 Known CisBP CCCAATCCCCTCC Direct PWM Open · Scan
M10133_2.00 Known CisBP TCCCCACT Direct PWM Open · Scan
M10134_2.00 Known CisBP TTCCCCCTCACCC Direct PWM Open · Scan
MZF1_HUMAN.H11MO.0.B Known HOCOMOCO GGAGGGGATTGGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 734 aa
381-676

Region 381-676 0 PWM

Residues
296 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 381-6761 model
Actions
Predicted = Low TFS_P28698:381:676_5wjq_D_1 5wjq 381-676 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
40-127PF02023SCAN domainNo overlap with loaded model regions
357-378PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
384-406PF00096Zinc finger, C2H2 typeoverlaps 381-676
412-434PF00096Zinc finger, C2H2 typeoverlaps 381-676
440-462PF00096Zinc finger, C2H2 typeoverlaps 381-676
541-563PF00096Zinc finger, C2H2 typeoverlaps 381-676
569-591PF00096Zinc finger, C2H2 typeoverlaps 381-676
597-619PF00096Zinc finger, C2H2 typeoverlaps 381-676
625-647PF00096Zinc finger, C2H2 typeoverlaps 381-676
653-675PF00096Zinc finger, C2H2 typeoverlaps 381-676
681-703PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
709-731PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions