ModCRE DB

Transcription factor

P31267 - HOXA6

Homeobox protein Hox-A6 (Homeobox protein Hox-1B)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 233 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
MA1497.1 Known JASPAR GGTAATTAAC Direct PWM Open · Scan
MA1497.2 Known JASPAR GTAATTA Direct PWM Open · Scan
M04974_2.00 Known CisBP GTTAATTACC Direct PWM Open · Scan
M04975_2.00 Known CisBP GTTAATTACC Direct PWM Open · Scan
M04976_2.00 Known CisBP TTAACGAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 233 aa
130-215

Region 130-215 0 PWM

Residues
86 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
2R5Y
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 130-2151 model
Actions
Predicted = Low DIMER_P31267:130:215_2r5y_A_1 2r5y 130-215 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
156-212PF00046Homeodomainoverlaps 130-215