ModCRE DB

Transcription factor

P31268 - HOXA7

Homeobox protein Hox-A7 (Homeobox protein Hox 1.1) (Homeobox protein Hox-1A)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 230 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA1498.1 Known JASPAR GCAATTAC Direct PWM Open · Scan
MA1498.2 Known JASPAR GCAATTAA Direct PWM Open · Scan
MA1498.3 Known JASPAR CAATTA Direct PWM Open · Scan
M05069_2.00 Known CisBP GTAATTGC Direct PWM Open · Scan
M05070_2.00 Known CisBP GTAATTGC Direct PWM Open · Scan
M05071_2.00 Known CisBP TTAACGAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 230 aa
120-188

Region 120-188 0 PWM

Residues
69 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1B8I
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 120-1881 model
Actions
Predicted = Low DIMER_P31268:120:188_1b8i_A_1 1b8i 120-188 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
131-187PF00046Homeodomainoverlaps 120-188