Transcription factor

P31269 - HOXA9

Homeobox protein Hox-A9 (Homeobox protein Hox-1G)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 272 aa

11 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known11

Motif	Prediction	Source	DNA binding	Support	Actions
MA0594.2	Known	JASPAR	GTCGTAAACG	Direct PWM	Open · Scan
MA0594.3	Known	JASPAR	GTCGTAA	Direct PWM	Open · Scan
M03085_2.00	Known	CisBP	ATTTTTACGACC	Direct PWM	Open · Scan
M03086_2.00	Known	CisBP	TTTTTATTACC	Direct PWM	Open · Scan
M04932_2.00	Known	CisBP	GGTTAATGGC	Direct PWM	Open · Scan
M04933_2.00	Known	CisBP	CGTTTACGAC	Direct PWM	Open · Scan
M04934_2.00	Known	CisBP	CGTTAATGGC	Direct PWM	Open · Scan
M04935_2.00	Known	CisBP	CATTTACGAC	Direct PWM	Open · Scan
M09130_2.00	Known	CisBP	TCATAAATCATC	Direct PWM	Open · Scan
M09131_2.00	Known	CisBP	CCATAAATCAT	Direct PWM	Open · Scan
HXA9_HUMAN.H11MO.0.B	Known	HOCOMOCO	ATGATTTATGG	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 272 aa

200-263

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 200-2631 model

				Actions
Predicted = Low	DIMER_P31269:200:263_5zjq_A_1	5zjq	200-263	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
1-193	PF04617	Hox9 activation region	No overlap with loaded model regions
207-263	PF00046	Homeodomain	overlaps 200-263