ModCRE DB

Transcription factor

P31270 - HOXA11

Homeobox protein Hox-A11 (Homeobox protein Hox-1I)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 313 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA0911.1 Known JASPAR GGTCGTAAAATT Direct PWM Open · Scan
MA0911.2 Known JASPAR GTCGTAAAA Direct PWM Open · Scan
M04897_2.00 Known CisBP GGTCGTAAAAT Direct PWM Open · Scan
M04898_2.00 Known CisBP GTTTTATGGCC Direct PWM Open · Scan
M04899_2.00 Known CisBP GGTCGTAAAAC Direct PWM Open · Scan
M04900_2.00 Known CisBP ATTTTATTACC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 313 aa
242-298

Region 242-298 0 PWM

Residues
57 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
5ZJR
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 242-2981 model
Actions
Predicted = Low DIMER_P31270:242:298_5zjr_A_1 5zjr 242-298 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
25-152PF12045Protein of unknown function (DUF3528)No overlap with loaded model regions
242-298PF00046Homeodomainoverlaps 242-298