ModCRE DB

Transcription factor

P31275 - HOXC12

Homeobox protein Hox-C12 (Homeobox protein Hox-3F)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 282 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
MA0906.1 Known JASPAR GGTCGTAAAAA Direct PWM Open · Scan
MA0906.2 Known JASPAR GGTCGTAAAA Direct PWM Open · Scan
M03135_2.00 Known CisBP TTTTATTAC Direct PWM Open · Scan
M03136_2.00 Known CisBP GGTCGTAAAAA Direct PWM Open · Scan
M05083_2.00 Known CisBP GGTAATAAAAT Direct PWM Open · Scan
M05084_2.00 Known CisBP GGTCGTAAAAC Direct PWM Open · Scan
M05085_2.00 Known CisBP GGTAATAAAAA Direct PWM Open · Scan
M05086_2.00 Known CisBP GGTCGTAAAAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 282 aa
215-271

Region 215-271 0 PWM

Residues
57 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
5ZJR
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 215-2711 model
Actions
Predicted = Low DIMER_P31275:215:271_5zjr_A_1 5zjr 215-271 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
215-271PF00046Homeodomainoverlaps 215-271