ModCRE DB

Transcription factor

P31276 - HOXC13

Homeobox protein Hox-C13 (Homeobox protein Hox-3G)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 330 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0907.1 Known JASPAR GCTCGTAAAAA Direct PWM Open · Scan
MA0907.2 Known JASPAR CTCGTAAAA Direct PWM Open · Scan
M03129_2.00 Known CisBP TTTTTATTGG Direct PWM Open · Scan
M03130_2.00 Known CisBP GCTCGTAAAAA Direct PWM Open · Scan
M05072_2.00 Known CisBP GTTTTATTGGG Direct PWM Open · Scan
M05073_2.00 Known CisBP GCTCGTAAAAC Direct PWM Open · Scan
M05074_2.00 Known CisBP GCTCGTAAAAC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 330 aa
261-317

Region 261-317 0 PWM

Residues
57 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
5ZJR
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 261-3171 model
Actions
Predicted = Low DIMER_P31276:261:317_5zjr_A_1 5zjr 261-317 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
56-168PF12284Hox protein A13 N terminalNo overlap with loaded model regions
261-317PF00046Homeodomainoverlaps 261-317