ModCRE DB

Transcription factor

P35452 - HOXD12

Homeobox protein Hox-D12 (Homeobox protein Hox-4H)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 270 aa

10 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known10
MotifPredictionSourceDNA bindingSupportLogoActions
MA0873.1 Known JASPAR AGTCGTAAAAA Direct PWM Open · Scan
MA0873.2 Known JASPAR AGTCGTAAAA Direct PWM Open · Scan
MA1958.1 Known JASPAR GGGCGGAAGTCGTAAAA Direct PWM Open · Scan
MA1958.2 Known JASPAR CGGAAGTCGTAAA Direct PWM Open · Scan
M03206_2.00 Known CisBP GTAATAAAA Direct PWM Open · Scan
M03207_2.00 Known CisBP AGTCGTAAAAA Direct PWM Open · Scan
M03208_2.00 Known CisBP GGTCGTAAAAT Direct PWM Open · Scan
M03209_2.00 Known CisBP TTTTATTAC Direct PWM Open · Scan
M05279_2.00 Known CisBP GTTTACGACC Direct PWM Open · Scan
M05280_2.00 Known CisBP GGTCGTAAAA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 270 aa
203-259

Region 203-259 0 PWM

Residues
57 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
5ZJR
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 203-2591 model
Actions
Predicted = Low DIMER_P35452:203:259_5zjr_A_1 5zjr 203-259 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
203-259PF00046Homeodomainoverlaps 203-259