Transcription factor

P35548 - MSX2

Homeobox protein MSX-2 (Homeobox protein Hox-8)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 267 aa

11 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known11

Motif	Prediction	Source	DNA binding	Support	Actions
MA0708.1	Known	JASPAR	CCAATTAA	Direct PWM	Open · Scan
MA0708.2	Known	JASPAR	CCAATTAA	Direct PWM	Open · Scan
MA0708.3	Known	JASPAR	CAATTA	Direct PWM	Open · Scan
M00288_2.00	Known	CisBP	CTAATTGG	Direct PWM	Open · Scan
M00289_2.00	Known	CisBP	TAATTGGT	Direct PWM	Open · Scan
M00290_2.00	Known	CisBP	TAATTGGT	Direct PWM	Open · Scan
M03127_2.00	Known	CisBP	TAATTGGTTTTTAATTGC	Direct PWM	Open · Scan
M03128_2.00	Known	CisBP	TTAATTGG	Direct PWM	Open · Scan
M05060_2.00	Known	CisBP	TTAATTGG	Direct PWM	Open · Scan
M05061_2.00	Known	CisBP	TTAATTGC	Direct PWM	Open · Scan
M05062_2.00	Known	CisBP	TTAACGAG	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 267 aa

143-198

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 143-1981 model

				Actions
Predicted = Low	DIMER_P35548:143:198_2hdd_B_1	2hdd	143-198	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
143-199	PF00046	Homeodomain	overlaps 143-198