ModCRE DB

Transcription factor

P35680 - HNF1B

Hepatocyte nuclear factor 1-beta (HNF-1-beta) (HNF-1B) (Homeoprotein LFB3) (Transcription factor 2) (TCF-2) (Variant hepatic nuclear factor 1) (vHNF1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 557 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA0153.1 Known JASPAR TTAATATTTAAC Direct PWM Open · Scan
MA0153.2 Known JASPAR GTTAATGATTAAC Direct PWM Open · Scan
M03245_2.00 Known CisBP GTTAATGATTAAC Direct PWM Open · Scan
M03246_2.00 Known CisBP AGTTAATCATTAACT Direct PWM Open · Scan
M09168_2.00 Known CisBP GGTTAATGATTAACC Direct PWM Open · Scan
HNF1B_HUMAN.H11MO.0.A Known HOCOMOCO GGTTAATGATTAACC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 557 aa
232-272

Region 232-272 0 PWM

Residues
41 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 232-2721 model
Actions
Predicted = Low DIMER_P35680:232:272_1fjl_B_1 1fjl 232-272 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-174PF04814Hepatocyte nuclear factor 1 (HNF-1), N terminusNo overlap with loaded model regions
314-550PF04812Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminusNo overlap with loaded model regions