ModCRE DB

Transcription factor

P36508 - ZNF76

Zinc finger protein 76 (Zinc finger protein 523)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 570 aa

20 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA1716.1 Known JASPAR CCTACCCACAATGCACCGCGC Direct PWM Open · Scan
MA1716.2 Known JASPAR ACCCACAATGCACCGCG Direct PWM Open · Scan
M04398_2.00 Known CisBP CCTACCCACAATGCACCGCGC Direct PWM Open · Scan
M04399_2.00 Known CisBP ATTACCCACAATGCATTGCGC Direct PWM Open · Scan
M08278_2.00 Known CisBP CCGCGGGGCATGCTGGGAGTT Direct PWM Open · Scan
M08856_2.00 Known CisBP ACTACAATTCCCAGAATGCCCC Direct PWM Open · Scan
ZNF76_HUMAN.H11MO.0.C Known HOCOMOCO GGGGCATTCTGGGAATTGTAGT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)8
MotifPredictionSourceDNA bindingSupportLogoActions
M00950_2.00 NN 70-40% CisBP GCAGCCCA 58.2% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 58.2% identity Open · Scan
MA0088.2 NN 70-40% JASPAR TACCCACAATGCATTG 56.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 56.0% identity Open · Scan
MA0088.1 NN 70-40% JASPAR GATTTCCCATAATGCCTTGC 54.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 52.7% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 50.6% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 50.0% identity Open · Scan
ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_P36508_ZNF76_HUMAN:163:279_2prt_A_1 ModCRE Homology model TCGGGGGGGCAC Region 163-279 · 1 3D model Open · Scan
TFS_sp_P36508_ZNF76_HUMAN:163:279_6b0o_A_1 ModCRE Homology model CGGGGCCGGGGC Region 163-279 · 1 3D model Open · Scan
TFS_sp_P36508_ZNF76_HUMAN:163:279_6b0p_D_1 ModCRE Homology model GGGGAACCCCGC Region 163-279 · 1 3D model Open · Scan
TFS_sp_P36508_ZNF76_HUMAN:163:279_6b0q_D_1 ModCRE Homology model GGGGGGGGGCCCC Region 163-279 · 1 3D model Open · Scan
TFS_sp_P36508_ZNF76_HUMAN:195:354_1tf6_A_1 ModCRE Homology model TATGTCCCCCCCCCCGCCCCCACGGGTA Region 195-354 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 570 aa
161-370

Region 161-370 5 PWM

Residues
210 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
11 active PDBs · 6 summary rows
Templates
1LLM, 1TF6, 2I13, 2PRT, 5V3J, 5V3M, 5WJQ, 6B0O, ...
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models 6 summary rows
Region 161-37011 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_P36508_ZNF76_HUMAN:223:275_1llm_D_1 1llm 223-275 View model · PDB
Predicted = Low TFS_sp_P36508_ZNF76_HUMAN:161:365_5wjq_D_1 5wjq 161-365 View model · PDB
Predicted = Low TFS_sp_P36508_ZNF76_HUMAN:162:370_5v3j_E_1 5v3j 162-370 View model · PDB
Predicted = Low TFS_sp_P36508_ZNF76_HUMAN:162:370_5v3m_C_1 5v3m 162-370 View model · PDB
Predicted = Low TFS_sp_P36508_ZNF76_HUMAN:163:279_2prt_A_1 2prt 163-279 View model · PDB
Predicted = Low TFS_sp_P36508_ZNF76_HUMAN:163:279_6b0o_A_1 6b0o 163-279 View model · PDB
Predicted = Low TFS_sp_P36508_ZNF76_HUMAN:163:279_6b0p_D_1 6b0p 163-279 View model · PDB
Predicted = Low TFS_sp_P36508_ZNF76_HUMAN:163:279_6b0q_D_1 6b0q 163-279 View model · PDB
Predicted = Low TFS_sp_P36508_ZNF76_HUMAN:176:339_2i13_A_1 2i13 176-339 View model · PDB
Predicted = Low TFS_sp_P36508_ZNF76_HUMAN:195:354_1tf6_A_1 1tf6 195-354 View model · PDB
Predicted = Low TFS_sp_P36508_ZNF76_HUMAN:223:368_6wmi_A_1 6wmi 223-368 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
2 6wmi 161:387 223 368 P:A · DNA:E,F 50.0% / 63.7% 100 View · PDB TFS_sp_P36508_ZNF76_HUMAN:223:368_6wmi_A_1
1 2i13 161:387 176 339 P:A · DNA:C,D 48.8% / 61.6% 100 View · PDB TFS_sp_P36508_ZNF76_HUMAN:176:339_2i13_A_1
1 1llm 161:387 223,223 275,275 P:C,D · DNA:A,B 47.2% / 60.4% 56,57 View · PDB DIMER_sp_P36508_ZNF76_HUMAN:223:275_1llm_D_1
3 5wjq 161:387 161 365 P:D · DNA:A,B 41.0% / 57.6% 68 View · PDB TFS_sp_P36508_ZNF76_HUMAN:161:365_5wjq_D_1
4 5v3m 161:387 162 370 P:C · DNA:A,B 38.8% / 55.5% 71 View · PDB TFS_sp_P36508_ZNF76_HUMAN:162:370_5v3m_C_1
5 5v3j 161:387 162 370 P:E · DNA:A,B 38.8% / 55.5% 71 View · PDB TFS_sp_P36508_ZNF76_HUMAN:162:370_5v3j_E_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
195-219PF00096Zinc finger, C2H2 typeoverlaps 161-370
225-249PF00096Zinc finger, C2H2 typeoverlaps 161-370
285-309PF00096Zinc finger, C2H2 typeoverlaps 161-370
315-339PF00096Zinc finger, C2H2 typeoverlaps 161-370
345-368PF00096Zinc finger, C2H2 typeoverlaps 161-370