ModCRE DB

Transcription factor

P36956 - SREBF1

Sterol regulatory element-binding protein 1 (SREBP-1) (Class D basic helix-loop-helix protein 1) (bHLHd1) (Sterol regulatory element-binding transcription factor 1) [Cleaved into: Processed sterol regulatory element-binding protein 1 (Transcription factor SREBF1)]

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1147 aa

12 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known12
MotifPredictionSourceDNA bindingSupportLogoActions
MA0595.1 Known JASPAR ATCACCCCAC Direct PWM Open · Scan
MA0829.2 Known JASPAR AGATCACCTGATCT Direct PWM Open · Scan
MA0829.3 Known JASPAR ATCACCTGAT Direct PWM Open · Scan
M04062_2.00 Known CisBP ATCACGCCAC Direct PWM Open · Scan
M04063_2.00 Known CisBP ATCACGTGAC Direct PWM Open · Scan
M04064_2.00 Known CisBP ATCACCCCAC Direct PWM Open · Scan
M04065_2.00 Known CisBP ATCACCTGAT Direct PWM Open · Scan
M08048_2.00 Known CisBP ATCACCCCAC Direct PWM Open · Scan
M08711_2.00 Known CisBP CTCACCCCACC Direct PWM Open · Scan
M09797_2.00 Known CisBP GATCACGTGAC Direct PWM Open · Scan
M09798_2.00 Known CisBP GATCACCCCAC Direct PWM Open · Scan
SRBP1_HUMAN.H11MO.0.A Known HOCOMOCO GGTGGGGTGAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1147 aa
316-404

Region 316-404 0 PWM

Residues
89 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
5I50
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 316-4041 model
Actions
Predicted = Low DIMER_P36956:316:404_5i50_B_1 5i50 316-404 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
324-374PF00010Helix-loop-helix DNA-binding domainoverlaps 316-404