ModCRE DB

Transcription factor

P37275 - ZEB1

Zinc finger E-box-binding homeobox 1 (NIL-2-A zinc finger protein) (Negative regulator of IL2) (Transcription factor 8) (TCF-8)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1124 aa

13 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known13
MotifPredictionSourceDNA bindingSupportLogoActions
MA0103.2 Known JASPAR CCTCACCTG Direct PWM Open · Scan
MA0103.3 Known JASPAR CCCACCTGCGC Direct PWM Open · Scan
MA0103.4 Known JASPAR CACCTG Direct PWM Open · Scan
M07842_2.00 Known CisBP CTCACCTG Direct PWM Open · Scan
M08080_2.00 Known CisBP CCCACCTGCGC Direct PWM Open · Scan
M08190_2.00 Known CisBP CACACACCTG Direct PWM Open · Scan
M08848_2.00 Known CisBP CTCACCTGTC Direct PWM Open · Scan
M10089_2.00 Known CisBP TACTTACCTGTGT Direct PWM Open · Scan
M10090_2.00 Known CisBP ATTCACCTGTAC Direct PWM Open · Scan
M10091_2.00 Known CisBP CTGCACCTGTGC Direct PWM Open · Scan
M10092_2.00 Known CisBP CAGAAACAG Direct PWM Open · Scan
M10093_2.00 Known CisBP ACTCACCTGAA Direct PWM Open · Scan
ZEB1_HUMAN.H11MO.0.A Known HOCOMOCO GACAGGTGAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1124 aa
591-629

Region 591-629 0 PWM

Residues
39 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB
Templates
1HF0
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 591-6291 model
Actions
Predicted = Low DIMER_P37275:591:629_1hf0_B_1 1hf0 591-629 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
170-222PF05605Drought induced 19 protein (Di19), zinc-bindingNo overlap with loaded model regions
240-262PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
268-288PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
932-954PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
960-980PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions