ModCRE DB

Transcription factor

P40426 - PBX3

Pre-B-cell leukemia transcription factor 3 (Homeobox protein PBX3)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 434 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA1114.1 Known JASPAR GGGTGAGTGACAGGCGG Direct PWM Open · Scan
MA1114.2 Known JASPAR TGAGTGACAGG Direct PWM Open · Scan
M07971_2.00 Known CisBP GCCGGCCAATCAGAG Direct PWM Open · Scan
M08132_2.00 Known CisBP GGGTGAGTGACAGGCGG Direct PWM Open · Scan
M09155_2.00 Known CisBP TGATTGACAGG Direct PWM Open · Scan
M09560_2.00 Known CisBP TTGATTGACAGG Direct PWM Open · Scan
PBX3_HUMAN.H11MO.0.A Known HOCOMOCO TGATTGACAGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 434 aa
234-307

Region 234-307 0 PWM

Residues
74 aa
Domains
PF03792 · PBC domain PF05920 · Homeobox KN domain
3D models
1 active PDB
Templates
5ZJR
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 234-3071 model
Actions
Predicted = Low DIMER_P40426:234:307_5zjr_B_1 5zjr 234-307 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
45-234PF03792PBC domainoverlaps 234-307
254-292PF05920Homeobox KN domainoverlaps 234-307