ModCRE DB

Transcription factor

P41182 - BCL6

B-cell lymphoma 6 protein (BCL-6) (B-cell lymphoma 5 protein) (BCL-5) (Protein LAZ-3) (Zinc finger and BTB domain-containing protein 27) (Zinc finger protein 51)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 706 aa

10 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known10
MotifPredictionSourceDNA bindingSupportLogoActions
MA0463.2 Known JASPAR ATGCTTTCGAGGAATT Direct PWM Open · Scan
MA0463.3 Known JASPAR GCTTTCGAGGAAT Direct PWM Open · Scan
M00227_2.00 Known CisBP GTAATTAATT Direct PWM Open · Scan
M00228_2.00 Known CisBP TTCCTAGAAA Direct PWM Open · Scan
M04424_2.00 Known CisBP ATGCTTTCGAGGAATT Direct PWM Open · Scan
M04425_2.00 Known CisBP AATTCCTCGATTACGT Direct PWM Open · Scan
M04426_2.00 Known CisBP ATGCTTTCTAGGAATT Direct PWM Open · Scan
M04427_2.00 Known CisBP AATTCCTAGATTACGT Direct PWM Open · Scan
M08877_2.00 Known CisBP TGCTTTCTAGGAA Direct PWM Open · Scan
BCL6_HUMAN.H11MO.0.A Known HOCOMOCO TGCTTTCTAGGAA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 706 aa
518-676

Region 518-676 0 PWM

Residues
159 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 518-6761 model
Actions
Predicted = Low TFS_P41182:518:676_5v3j_E_1 5v3j 518-676 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
22-128PF00651BTB/POZ domainNo overlap with loaded model regions
546-568PF00096Zinc finger, C2H2 typeoverlaps 518-676
574-596PF00096Zinc finger, C2H2 typeoverlaps 518-676
602-624PF00096Zinc finger, C2H2 typeoverlaps 518-676
630-652PF00096Zinc finger, C2H2 typeoverlaps 518-676