ModCRE DB

Transcription factor

P43694 - GATA4

Transcription factor GATA-4 (GATA-binding factor 4)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 442 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0482.2 Known JASPAR TTCCTTATCTTT Direct PWM Open · Scan
MA0482.3 Known JASPAR CCTTATCT Direct PWM Open · Scan
M03066_2.00 Known CisBP AGATAAGA Direct PWM Open · Scan
M04875_2.00 Known CisBP GAGATAACGC Direct PWM Open · Scan
M04876_2.00 Known CisBP CAGATAAGAA Direct PWM Open · Scan
M09117_2.00 Known CisBP ACAGATAAGA Direct PWM Open · Scan
GATA4_HUMAN.H11MO.0.A Known HOCOMOCO ACAGATAAGA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 442 aa
214-318

Region 214-318 0 PWM

Residues
105 aa
Domains
PF00320 · GATA zinc finger PF00320 · GATA zinc finger
3D models
1 active PDB
Templates
4HC7
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 214-3181 model
Actions
Predicted = Low TFS_P43694:214:318_4hc7_A_1 4hc7 214-318 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
1-204PF05349GATA-type transcription activator, N-terminalNo overlap with loaded model regions
217-249PF00320GATA zinc fingeroverlaps 214-318
271-304PF00320GATA zinc fingeroverlaps 214-318