Region 161-217 0 PWM
- Residues
- 57 aa
- Domains
- PF00046 · Homeodomain
- 3D models
- 1 active PDB
- Templates
- 3RKQ
- Sources
- Structure model
Transcription factor
P43699 - NKX2-1
Homeobox protein Nkx-2.1 (Homeobox protein NK-2 homolog A) (Thyroid nuclear factor 1) (Thyroid transcription factor 1) (TTF-1) (Thyroid-specific enhancer-binding protein) (T/EBP)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 371 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M09146_2.00 | Known | CisBP | CTTGAGTGGC | Direct PWM | Open · Scan | |
| NKX21_HUMAN.H11MO.0.A | Known | HOCOMOCO | CTTGAGTGGC | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
371 aa
161-217
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 161-2171 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_P43699:161:217_3rkq_A_1 | 3rkq | 161-217 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 162-218 | PF00046 | Homeodomain | overlaps 161-217 |