Transcription factor

P47902 - CDX1

Homeobox protein CDX-1 (Caudal-type homeobox protein 1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 265 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8

Motif	Prediction	Source	DNA binding	Support	Actions
MA0878.1	Known	JASPAR	GCAATAAAA	Direct PWM	Open · Scan
MA0878.2	Known	JASPAR	GGCCATAAAAC	Direct PWM	Open · Scan
MA0878.3	Known	JASPAR	GGCAATAAAA	Direct PWM	Open · Scan
M03115_2.00	Known	CisBP	TTTTATTGC	Direct PWM	Open · Scan
M05018_2.00	Known	CisBP	GTTTTATGGCC	Direct PWM	Open · Scan
M05019_2.00	Known	CisBP	GGTCGTAAAAC	Direct PWM	Open · Scan
M09140_2.00	Known	CisBP	ACATAAAT	Direct PWM	Open · Scan
CDX1_HUMAN.H11MO.0.C	Known	HOCOMOCO	ATTTATGT	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 265 aa

130-214

Residues: 85 aa
Domains: PF04731 · Caudal like protein activation region PF00046 · Homeodomain
3D models: 1 active PDB
Templates: 2R5Y
Sources: Structure model

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 130-2141 model

				Actions
Predicted = Low	DIMER_P47902:130:214_2r5y_A_1	2r5y	130-214	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
13-144	PF04731	Caudal like protein activation region	overlaps 130-214
156-211	PF00046	Homeodomain	overlaps 130-214