Transcription factor

P48742 - LHX1

LIM/homeobox protein Lhx1 (LIM homeobox protein 1) (Homeobox protein Lim-1) (hLim-1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 406 aa

3 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known3

Motif	Prediction	Source	DNA binding	Support	Actions
MA1518.1	Known	JASPAR	GCAATTAC	Direct PWM	Open · Scan
M05410_2.00	Known	CisBP	GTAATTGC	Direct PWM	Open · Scan
M05411_2.00	Known	CisBP	GTAACGAG	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 406 aa

177-239

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 177-2391 model

				Actions
Predicted = Low	DIMER_P48742:177:239_5hod_A_1	5hod	177-239	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
4-59	PF00412	LIM domain	No overlap with loaded model regions
63-120	PF00412	LIM domain	No overlap with loaded model regions
181-237	PF00046	Homeodomain	overlaps 177-239