ModCRE DB

Transcription factor

P49715 - CEBPA

CCAAT/enhancer-binding protein alpha (C/EBP alpha)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 358 aa

11 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known11
MotifPredictionSourceDNA bindingSupportLogoActions
MA0102.3 Known JASPAR ATTGCACAATA Direct PWM Open · Scan
MA0102.4 Known JASPAR TTATTGCACAATAT Direct PWM Open · Scan
MA0102.5 Known JASPAR ATTGCACAAT Direct PWM Open · Scan
M04045_2.00 Known CisBP GGTTACGCAACC Direct PWM Open · Scan
M08076_2.00 Known CisBP TATTGTGCAAT Direct PWM Open · Scan
M08813_2.00 Known CisBP GGTTGTGCAATC Direct PWM Open · Scan
M10023_2.00 Known CisBP AACTTACCAAACA Direct PWM Open · Scan
M10024_2.00 Known CisBP TGATTTTGCAATAT Direct PWM Open · Scan
M10028_2.00 Known CisBP GGTATTTGGCAATGCACA Direct PWM Open · Scan
M10029_2.00 Known CisBP TAATTACGCAATGT Direct PWM Open · Scan
CEBPA_HUMAN.H11MO.0.A Known HOCOMOCO GGTTGTGCAATC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 358 aa
279-345

Region 279-345 0 PWM

Residues
67 aa
Domains
PF07716 · Basic region leucine zipper
3D models
1 active PDB
Templates
1GTW
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 279-3451 model
Actions
Predicted = Low DIMER_P49715:279:345_1gtw_B_1 1gtw 279-345 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
282-334PF07716Basic region leucine zipperoverlaps 279-345