ModCRE DB

Transcription factor

P50553 - ASCL1

Achaete-scute homolog 1 (ASH-1) (hASH1) (Class A basic helix-loop-helix protein 46) (bHLHa46)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 236 aa

10 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known10
MotifPredictionSourceDNA bindingSupportLogoActions
MA1100.1 Known JASPAR GCAGCAGCTGGCG Direct PWM Open · Scan
MA1100.2 Known JASPAR GGCAGCTGCC Direct PWM Open · Scan
MA1100.3 Known JASPAR GCAGCTGC Direct PWM Open · Scan
MA1631.1 Known JASPAR CAGCACCTGCCCC Direct PWM Open · Scan
MA1631.2 Known JASPAR GCACCTGCC Direct PWM Open · Scan
M04135_2.00 Known CisBP GGCAGCTGCC Direct PWM Open · Scan
M04136_2.00 Known CisBP AGCAGCTGCT Direct PWM Open · Scan
M08055_2.00 Known CisBP GCAGCAGCTGGCG Direct PWM Open · Scan
M08730_2.00 Known CisBP CTGCACCTGCTCCC Direct PWM Open · Scan
ASCL1_HUMAN.H11MO.0.A Known HOCOMOCO CTGCACCTGCTCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 236 aa
121-177

Region 121-177 0 PWM

Residues
57 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1HLO
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 121-1771 model
Actions
Predicted = Low DIMER_P50553:121:177_1hlo_B_1 1hlo 121-177 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
121-171PF00010Helix-loop-helix DNA-binding domainoverlaps 121-177