ModCRE DB

Transcription factor

P51449 - RORC

Nuclear receptor ROR-gamma (Nuclear receptor RZR-gamma) (Nuclear receptor subfamily 1 group F member 3) (RAR-related orphan receptor C) (Retinoid-related orphan receptor-gamma)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 518 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9
MotifPredictionSourceDNA bindingSupportLogoActions
MA1151.1 Known JASPAR ATAAGTAGGTCA Direct PWM Open · Scan
MA1151.2 Known JASPAR AAGTAGGTCA Direct PWM Open · Scan
M05621_2.00 Known CisBP TAGGTCATGACCTA Direct PWM Open · Scan
M05622_2.00 Known CisBP AAAGTAGGTCAGTAGGTCAC Direct PWM Open · Scan
M05623_2.00 Known CisBP TAGGTCATGACCTA Direct PWM Open · Scan
M05624_2.00 Known CisBP TAAGTAGGTCAGTAGGTCAA Direct PWM Open · Scan
M05880_2.00 Known CisBP ATAAGTAGGTCA Direct PWM Open · Scan
M09282_2.00 Known CisBP GAAAGTGGGTCA Direct PWM Open · Scan
RORG_HUMAN.H11MO.0.C Known HOCOMOCO GAAAGTGGGTCA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 518 aa
28-106

Region 28-106 0 PWM

Residues
79 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1HLZ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 28-1061 model
Actions
Predicted = Low DIMER_P51449:28:106_1hlz_A_1 1hlz 28-106 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
30-98PF00105Double treble clef zinc finger, C4 typeoverlaps 28-106
321-486PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions