ModCRE DB

Transcription factor

P51504 - ZNF80

Zinc finger protein 80 (ZNFpT17)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 273 aa

63 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)53
MotifPredictionSourceDNA bindingSupportLogoActions
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 58.0% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 57.1% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 56.6% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 56.4% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 56.4% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 56.4% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 56.4% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 56.2% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 55.9% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 55.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 55.2% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 55.1% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 54.9% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 54.5% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 54.1% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 54.1% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 54.0% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 53.8% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 53.8% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 53.6% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 53.6% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 53.5% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 53.3% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 53.2% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 53.2% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 53.1% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 52.9% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 52.9% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 52.9% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 52.8% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 52.6% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 52.4% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 52.3% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 52.0% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 52.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 52.0% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 52.0% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 51.8% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 51.7% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 51.5% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 51.3% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 51.3% identity Open · Scan
M07631_2.00 NN 70-40% CisBP AATTTCAAAAATGCTATGGGC 51.2% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 51.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 51.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 50.7% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 50.6% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 50.4% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 50.4% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.2% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 50.2% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 50.0% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 50.0% identity Open · Scan
ModCRE10
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_P51504_ZNF80_HUMAN:241:268_5v3j_E_1 ModCRE Homology model AACACACAAGTG Region 241-268 · 1 3D model Open · Scan
TFS_sp_P51504_ZNF80_HUMAN:241:268_5v3m_C_1 ModCRE Homology model ACCCACAGGGG Region 241-268 · 1 3D model Open · Scan
TFS_sp_P51504_ZNF80_HUMAN:241:271_1g2d_C_1 ModCRE Homology model GAAAATCGATGGC Region 241-271 · 1 3D model Open · Scan
TFS_sp_P51504_ZNF80_HUMAN:241:271_2i13_A_1 ModCRE Homology model ACCTCTTAGCAGTA Region 241-271 · 1 3D model Open · Scan
TFS_sp_P51504_ZNF80_HUMAN:241:271_5wjq_D_1 ModCRE Homology model TCCCCGGGCCTG Region 241-271 · 1 3D model Open · Scan
TFS_sp_P51504_ZNF80_HUMAN:47:156_5ei9_E_1 ModCRE Homology model AAGCCGGCCTTTTTTCC Region 47-156 · 1 3D model Open · Scan
TFS_sp_P51504_ZNF80_HUMAN:47:271_5wjq_D_1 ModCRE Homology model GGGACCCGCCCCCCCCCGTCCGGGGGC Region 47-271 · 1 3D model Open · Scan
TFS_sp_P51504_ZNF80_HUMAN:49:271_5v3j_E_1 ModCRE Homology model CCGGCCACCAACCTGGGGTTCT Region 49-271 · 1 3D model Open · Scan
TFS_sp_P51504_ZNF80_HUMAN:49:271_5v3m_C_1 ModCRE Homology model CCCTCCCCCCCCCCGGGGGGTC Region 49-271 · 1 3D model Open · Scan
TFS_sp_P51504_ZNF80_HUMAN:58:211_2i13_A_1 ModCRE Homology model TCTCGCAAACAGATACTTTGG Region 58-211 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 273 aa
47-271

Region 47-271 10 PWM

Residues
225 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
11 active PDBs · 6 summary rows
Templates
1G2D, 1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models 6 summary rows
Region 47-27111 models · 6 summary rows
Actions
Predicted = Low DIMER_sp_P51504_ZNF80_HUMAN:103:152_1llm_C_1 1llm 103-152 View model · PDB
Predicted = Low TFS_sp_P51504_ZNF80_HUMAN:241:268_5v3j_E_1 5v3j 241-268 View model · PDB
Predicted = Low TFS_sp_P51504_ZNF80_HUMAN:241:268_5v3m_C_1 5v3m 241-268 View model · PDB
Predicted = Low TFS_sp_P51504_ZNF80_HUMAN:241:271_1g2d_C_1 1g2d 241-271 View model · PDB
Predicted = Low TFS_sp_P51504_ZNF80_HUMAN:241:271_2i13_A_1 2i13 241-271 View model · PDB
Predicted = Low TFS_sp_P51504_ZNF80_HUMAN:241:271_5wjq_D_1 5wjq 241-271 View model · PDB
Predicted = Low TFS_sp_P51504_ZNF80_HUMAN:47:156_5ei9_E_1 5ei9 47-156 View model · PDB
Predicted = Low TFS_sp_P51504_ZNF80_HUMAN:47:271_5wjq_D_1 5wjq 47-271 View model · PDB
Predicted = Low TFS_sp_P51504_ZNF80_HUMAN:49:271_5v3j_E_1 5v3j 49-271 View model · PDB
Predicted = Low TFS_sp_P51504_ZNF80_HUMAN:49:271_5v3m_C_1 5v3m 49-271 View model · PDB
Predicted = Low TFS_sp_P51504_ZNF80_HUMAN:58:211_2i13_A_1 2i13 58-211 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 5ei9 46:271 47 156 P:E · DNA:A,B 52.7% / 69.1% 99 View · PDB TFS_sp_P51504_ZNF80_HUMAN:47:156_5ei9_E_1
4 2i13 46:271 58 211 P:A · DNA:C,D 51.3% / 66.2% 100 View · PDB TFS_sp_P51504_ZNF80_HUMAN:58:211_2i13_A_1
1 5v3m 46:271 49 271 P:C · DNA:A,B 49.8% / 61.9% 80 View · PDB TFS_sp_P51504_ZNF80_HUMAN:49:271_5v3m_C_1
2 5v3j 46:271 49 271 P:E · DNA:A,B 49.8% / 61.9% 80 View · PDB TFS_sp_P51504_ZNF80_HUMAN:49:271_5v3j_E_1
3 5wjq 46:271 47 271 P:D · DNA:A,B 48.4% / 63.6% 80 View · PDB TFS_sp_P51504_ZNF80_HUMAN:47:271_5wjq_D_1
1 1llm 46:271 103,103 152,152 P:C,D · DNA:A,B 40.0% / 58.0% 57,58 View · PDB DIMER_sp_P51504_ZNF80_HUMAN:103:152_1llm_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
49-71PF00096Zinc finger, C2H2 typeoverlaps 47-271
133-155PF00096Zinc finger, C2H2 typeoverlaps 47-271
163-183PF00096Zinc finger, C2H2 typeoverlaps 47-271
189-211PF00096Zinc finger, C2H2 typeoverlaps 47-271
217-239PF00096Zinc finger, C2H2 typeoverlaps 47-271