ModCRE DB

Transcription factor

P52737 - ZNF136

Zinc finger protein 136

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 540 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA1588.1 Known JASPAR GAATTCTTGGTTGAC Direct PWM Open · Scan
M07708_2.00 Known CisBP GTTTTGCTGGATATAGTATTCTTGGTT Direct PWM Open · Scan
M08265_2.00 Known CisBP TCATTTTTGAAGGATAGTTTT Direct PWM Open · Scan
M08374_2.00 Known CisBP CTGGATATAGTATTCTTG Direct PWM Open · Scan
M08946_2.00 Known CisBP TGCTGGATATAGTATTCTTGGTTG Direct PWM Open · Scan
ZN136_HUMAN.H11MO.0.C Known HOCOMOCO TGCTGGATATAGTATTCTTGGTTG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 540 aa
195-471

Region 195-471 0 PWM

Residues
277 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13894 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 195-4711 model
Actions
Predicted = Low TFS_P52737:195:471_5wjq_D_1 5wjq 195-471 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
3-44PF01352KRAB boxNo overlap with loaded model regions
168-190PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
196-218PF00096Zinc finger, C2H2 typeoverlaps 195-471
224-246PF13912C2H2-type zinc fingeroverlaps 195-471
252-274PF00096Zinc finger, C2H2 typeoverlaps 195-471
280-302PF00096Zinc finger, C2H2 typeoverlaps 195-471
308-330PF00096Zinc finger, C2H2 typeoverlaps 195-471
336-358PF00096Zinc finger, C2H2 typeoverlaps 195-471
364-386PF13894C2H2-type zinc fingeroverlaps 195-471
392-414PF00096Zinc finger, C2H2 typeoverlaps 195-471
420-442PF00096Zinc finger, C2H2 typeoverlaps 195-471
448-470PF00096Zinc finger, C2H2 typeoverlaps 195-471
476-498PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions