ModCRE DB

Transcription factor

P52744 - ZNF138

Zinc finger protein 138

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 262 aa

65 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 74.1% identity Open · Scan
M08295_2.00 NN 70+% CisBP CTGCTGGAATCTCCA 73.0% identity Open · Scan
Nearest Neighbor (70% - 40%)63
MotifPredictionSourceDNA bindingSupportLogoActions
M07715_2.00 NN 70-40% CisBP CCGCCGCCGCCGTGG 67.1% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 66.0% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 65.6% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 64.5% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 62.0% identity Open · Scan
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 61.2% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 60.0% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 59.7% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 59.1% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 59.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 58.8% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 58.1% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 57.6% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 57.6% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 57.6% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 56.5% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 56.5% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 56.4% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 56.4% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 56.4% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 56.4% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 56.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 55.2% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 55.2% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 55.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 54.8% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 54.4% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 54.0% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 54.0% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 54.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 53.9% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 53.8% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.8% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 53.5% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 53.5% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 53.2% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 53.0% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 52.7% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 52.5% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 52.4% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 52.2% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 52.1% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 51.9% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 51.9% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 51.6% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 51.6% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.5% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 51.5% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 51.5% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 51.3% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 51.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 51.0% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 50.9% identity Open · Scan
M03686_2.00 NN 70-40% CisBP TGATTGCTCTTTT 50.8% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 50.8% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 50.7% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 50.7% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 50.6% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 50.5% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 50.0% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 50.0% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 50.0% identity Open · Scan
M08889_2.00 NN 70-40% CisBP GCTGCTCTTTTT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 262 aa
125-260

Region 125-260 0 PWM

Residues
136 aa
Domains
PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 125-2601 model
Actions
Predicted = Low TFS_P52744:125:260_2i13_A_1 2i13 125-260 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
109-133PF13912C2H2-type zinc fingeroverlaps 125-260
166-185PF00096Zinc finger, C2H2 typeoverlaps 125-260
194-216PF00096Zinc finger, C2H2 typeoverlaps 125-260
222-242PF00096Zinc finger, C2H2 typeoverlaps 125-260