ModCRE DB

Transcription factor

P52747 - ZNF143

Zinc finger protein 143 (SPH-binding factor) (Selenocysteine tRNA gene transcription-activating factor) (hStaf)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 638 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
MA0088.2 Known JASPAR TACCCACAATGCATTG Direct PWM Open · Scan
M02899_2.00 Known CisBP TACCCACAATGCATTG Direct PWM Open · Scan
M07931_2.00 Known CisBP GACTACAATTCCCAG Direct PWM Open · Scan
M08910_2.00 Known CisBP GAACTACAATTCCCAGAATGCC Direct PWM Open · Scan
M09510_2.00 Known CisBP ATTTCCCAGAATGCC Direct PWM Open · Scan
M10247_2.00 Known CisBP TTTACCCACAATGCATTGCGCC Direct PWM Open · Scan
M10248_2.00 Known CisBP ATTTCCCATCATGCCTTGCGA Direct PWM Open · Scan
ZN143_HUMAN.H11MO.0.A Known HOCOMOCO GGCATTCTGGGAATTGTAGTTC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 638 aa
234-447

Region 234-447 0 PWM

Residues
214 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 234-4471 model
Actions
Predicted = Low TFS_P52747:234:447_5v3j_E_1 5v3j 234-447 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
237-261PF00096Zinc finger, C2H2 typeoverlaps 234-447
267-291PF00096Zinc finger, C2H2 typeoverlaps 234-447
297-321PF00096Zinc finger, C2H2 typeoverlaps 234-447
357-381PF00096Zinc finger, C2H2 typeoverlaps 234-447
417-440PF00096Zinc finger, C2H2 typeoverlaps 234-447