ModCRE DB

Transcription factor

P52945 - PDX1

Pancreas/duodenum homeobox protein 1 (PDX-1) (Glucose-sensitive factor) (GSF) (Insulin promoter factor 1) (IPF-1) (Insulin upstream factor 1) (IUF-1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 283 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9
MotifPredictionSourceDNA bindingSupportLogoActions
MA0132.2 Known JASPAR GTAATTAG Direct PWM Open · Scan
MA0132.3 Known JASPAR TAATTA Direct PWM Open · Scan
M03155_2.00 Known CisBP TTAATTACCGTTAATTAC Direct PWM Open · Scan
M03156_2.00 Known CisBP CTAATTAC Direct PWM Open · Scan
M05161_2.00 Known CisBP CTAATTAC Direct PWM Open · Scan
M05162_2.00 Known CisBP TTAATGAC Direct PWM Open · Scan
M05163_2.00 Known CisBP CTAATTAC Direct PWM Open · Scan
M09147_2.00 Known CisBP TGATTGATG Direct PWM Open · Scan
PDX1_HUMAN.H11MO.0.A Known HOCOMOCO TGATTGATG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 283 aa
147-207

Region 147-207 0 PWM

Residues
61 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
5ZJR
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 147-2071 model
Actions
Predicted = Low DIMER_P52945:147:207_5zjr_A_1 5zjr 147-207 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
147-203PF00046Homeodomainoverlaps 147-207