ModCRE DB

Transcription factor

P54821 - PRRX1

Paired mesoderm homeobox protein 1 (Homeobox protein PHOX1) (Paired-related homeobox protein 1) (PRX-1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 245 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
MA0716.1 Known JASPAR CTAATTAA Direct PWM Open · Scan
MA0716.2 Known JASPAR TAATTA Direct PWM Open · Scan
M03120_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M03121_2.00 Known CisBP TTAATTGG Direct PWM Open · Scan
M03122_2.00 Known CisBP TAATTAGATTA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 245 aa
93-156

Region 93-156 0 PWM

Residues
64 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 93-1561 model
Actions
Predicted = Low DIMER_P54821:93:156_1fjl_A_1 1fjl 93-156 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
95-151PF00046Homeodomainoverlaps 93-156
220-235PF03826OAR motifNo overlap with loaded model regions