ModCRE DB

Transcription factor

P56693 - SOX10

Transcription factor SOX-10

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 466 aa

16 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known16
MotifPredictionSourceDNA bindingSupportLogoActions
MA0442.1 Known JASPAR CTTTGT Direct PWM Open · Scan
MA0442.2 Known JASPAR AAAACAAAGAA Direct PWM Open · Scan
MA0442.3 Known JASPAR ACAAAG Direct PWM Open · Scan
M03491_2.00 Known CisBP AACAATTGCAGTGTT Direct PWM Open · Scan
M03492_2.00 Known CisBP AACAATGTTCAGTGTT Direct PWM Open · Scan
M03493_2.00 Known CisBP ATCAATTGCAGTGAT Direct PWM Open · Scan
M03494_2.00 Known CisBP ATGAATTGCAGTCAT Direct PWM Open · Scan
M03495_2.00 Known CisBP TGAATGTTCAGTCA Direct PWM Open · Scan
M05759_2.00 Known CisBP AACAATGGCCCATTGTT Direct PWM Open · Scan
M05760_2.00 Known CisBP AACAATGGCCCATTGTT Direct PWM Open · Scan
M05761_2.00 Known CisBP AACAATGGATCCATTGTT Direct PWM Open · Scan
M05762_2.00 Known CisBP AACAATGGATCCATTGTT Direct PWM Open · Scan
M05891_2.00 Known CisBP TCCATTGTTA Direct PWM Open · Scan
M08165_2.00 Known CisBP AAAACAAAGAA Direct PWM Open · Scan
M09387_2.00 Known CisBP CAAAGGAGGCATTGTT Direct PWM Open · Scan
SOX10_HUMAN.H11MO.0.B Known HOCOMOCO CAAAGGAGGCATTGTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 466 aa
102-173

Region 102-173 0 PWM

Residues
72 aa
Domains
PF00505 · HMG (high mobility group) box
3D models
1 active PDB
Templates
4EUW
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 102-1731 model
Actions
Predicted = Low TFS_P56693:102:173_4euw_A_1 4euw 102-173 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
13-93PF12444Sox developmental protein N terminalNo overlap with loaded model regions
104-172PF00505HMG (high mobility group) boxoverlaps 102-173