ModCRE DB

Transcription factor

P56915 - GSC

Homeobox protein goosecoid

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 257 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0648.1 Known JASPAR GCTAATCCCC Direct PWM Open · Scan
MA0648.2 Known JASPAR TAATCC Direct PWM Open · Scan
M03146_2.00 Known CisBP GCTAATCCCC Direct PWM Open · Scan
M05134_2.00 Known CisBP CTAATCCG Direct PWM Open · Scan
M05135_2.00 Known CisBP CTAATCCG Direct PWM Open · Scan
M05136_2.00 Known CisBP CTAATCCC Direct PWM Open · Scan
M05137_2.00 Known CisBP CTAATCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 257 aa
159-223

Region 159-223 0 PWM

Residues
65 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 159-2231 model
Actions
Predicted = Low DIMER_P56915:159:223_1fjl_A_1 1fjl 159-223 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
161-217PF00046Homeodomainoverlaps 159-223