ModCRE DB

Transcription factor

P78337 - PITX1

Pituitary homeobox 1 (Hindlimb-expressed homeobox protein backfoot) (Homeobox protein PITX1) (Paired-like homeodomain transcription factor 1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 314 aa

9 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known9
MotifPredictionSourceDNA bindingSupportLogoActions
MA0682.2 Known JASPAR CTAATCCC Direct PWM Open · Scan
MA0682.3 Known JASPAR TAATCC Direct PWM Open · Scan
M03082_2.00 Known CisBP CTTAATCCC Direct PWM Open · Scan
M03083_2.00 Known CisBP CTTAATCCC Direct PWM Open · Scan
M03084_2.00 Known CisBP TTAATCCC Direct PWM Open · Scan
M04928_2.00 Known CisBP CTAATCCC Direct PWM Open · Scan
M04929_2.00 Known CisBP CTAATCCG Direct PWM Open · Scan
M04930_2.00 Known CisBP CTAATCCC Direct PWM Open · Scan
M04931_2.00 Known CisBP CTAATCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 314 aa
88-147

Region 88-147 0 PWM

Residues
60 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 88-1471 model
Actions
Predicted = Low DIMER_P78337:88:147_1fjl_A_1 1fjl 88-147 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
90-146PF00046Homeodomainoverlaps 88-147
276-293PF03826OAR motifNo overlap with loaded model regions