ModCRE DB

Transcription factor

P78367 - NKX3-2

Homeobox protein Nkx-3.2 (Bagpipe homeobox protein homolog 1) (Homeobox protein NK-3 homolog B)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 333 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known6
MotifPredictionSourceDNA bindingSupportLogoActions
MA0122.2 Known JASPAR ACCACTTAA Direct PWM Open · Scan
M05012_2.00 Known CisBP GTTAAGTGGT Direct PWM Open · Scan
M05013_2.00 Known CisBP GTTAAGTGGT Direct PWM Open · Scan
M05014_2.00 Known CisBP TTAACGAG Direct PWM Open · Scan
M09138_2.00 Known CisBP TTAAGTGTTT Direct PWM Open · Scan
NKX32_HUMAN.H11MO.0.C Known HOCOMOCO TTAAGTGTTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 333 aa
206-261

Region 206-261 0 PWM

Residues
56 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
3RKQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 206-2611 model
Actions
Predicted = Low DIMER_P78367:206:261_3rkq_B_1 3rkq 206-261 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
207-263PF00046Homeodomainoverlaps 206-261