ModCRE DB

Transcription factor

P78426 - NKX6-1

Homeobox protein Nkx-6.1 (Homeobox protein NK-6 homolog A)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 367 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
MA0674.1 Known JASPAR GTAATTAA Direct PWM Open · Scan
MA0674.2 Known JASPAR TAATTAA Direct PWM Open · Scan
M09151_2.00 Known CisBP GATTAATGGGAATTTAATG Direct PWM Open · Scan
M10718_2.00 Known CisBP TTTTTAATTGGTT Direct PWM Open · Scan
NKX61_HUMAN.H11MO.0.B Known HOCOMOCO GATTAATGGGAATTTAATG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 367 aa
235-297

Region 235-297 0 PWM

Residues
63 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 235-2971 model
Actions
Predicted = Low DIMER_P78426:235:297_1fjl_A_1 1fjl 235-297 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
237-293PF00046Homeodomainoverlaps 235-297