Transcription factor

Q00056 - HOXA4

Homeobox protein Hox-A4 (Homeobox protein Hox-1.4) (Homeobox protein Hox-1D)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 320 aa

4 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known4

Motif	Prediction	Source	DNA binding	Support	Actions
MA1496.1	Known	JASPAR	GTCATTAG	Direct PWM	Open · Scan
MA1496.2	Known	JASPAR	GTCATTA	Direct PWM	Open · Scan
M05381_2.00	Known	CisBP	CTAATGAC	Direct PWM	Open · Scan
M05382_2.00	Known	CisBP	TTAATGAT	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 320 aa

188-275

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 188-2751 model

				Actions
Predicted = Low	DIMER_Q00056:188:275_2r5y_A_1	2r5y	188-275	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
216-272	PF00046	Homeodomain	overlaps 188-275