ModCRE DB

Transcription factor

Q00613 - HSF1

Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 529 aa

13 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known13
MotifPredictionSourceDNA bindingSupportLogoActions
MA0486.1 Known JASPAR CTTCTAGAAGGTTCT Direct PWM Open · Scan
MA0486.2 Known JASPAR TTCTAGAACGTTC Direct PWM Open · Scan
M03329_2.00 Known CisBP GAACGTTCTAGAA Direct PWM Open · Scan
M03330_2.00 Known CisBP GAACGTTCTAGAA Direct PWM Open · Scan
M05523_2.00 Known CisBP GGAACGTTCTAGAAG Direct PWM Open · Scan
M05524_2.00 Known CisBP AGAACGTTCTAGAAC Direct PWM Open · Scan
M05525_2.00 Known CisBP GGAACGTTCTAGAAC Direct PWM Open · Scan
M05526_2.00 Known CisBP GGAACGTTCTAGAAC Direct PWM Open · Scan
M07977_2.00 Known CisBP GTCCCGGGTTCGAATCCC Direct PWM Open · Scan
M09230_2.00 Known CisBP TGGAAGGTTCTAGAA Direct PWM Open · Scan
M09592_2.00 Known CisBP CCTTCTGGAAGCTTCTAGAA Direct PWM Open · Scan
M10863_2.00 Known CisBP CGAACATTCT Direct PWM Open · Scan
HSF1_HUMAN.H11MO.0.A Known HOCOMOCO TGGAAGGTTCTAGAA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 529 aa
13-120

Region 13-120 0 PWM

Residues
108 aa
Domains
PF00447 · HSF-type DNA-binding
3D models
1 active PDB
Templates
5D5V
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 13-1201 model
Actions
Predicted = Low TFS_Q00613:13:120_5d5v_D_1 5d5v 13-120 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
18-118PF00447HSF-type DNA-bindingoverlaps 13-120
247-529PF06546Vertebrate heat shock transcription factorNo overlap with loaded model regions