ModCRE DB

Transcription factor

Q01094 - E2F1

Transcription factor E2F1 (E2F-1) (PBR3) (Retinoblastoma-associated protein 1) (RBAP-1) (Retinoblastoma-binding protein 3) (RBBP-3) (pRB-binding protein E2F-1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 437 aa

14 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known14
MotifPredictionSourceDNA bindingSupportLogoActions
MA0024.1 Known JASPAR TTTGGCGC Direct PWM Open · Scan
MA0024.2 Known JASPAR CGGGCGGGAGG Direct PWM Open · Scan
MA0024.3 Known JASPAR TTTGGCGCCAAA Direct PWM Open · Scan
M02952_2.00 Known CisBP ATTGGCGCCAAA Direct PWM Open · Scan
M02953_2.00 Known CisBP TTTGGCGCCAAA Direct PWM Open · Scan
M02954_2.00 Known CisBP TTTTGGCGCCAAAA Direct PWM Open · Scan
M02955_2.00 Known CisBP AAATGGCGCCATTT Direct PWM Open · Scan
M04700_2.00 Known CisBP AAATTGGCGCCAAAAT Direct PWM Open · Scan
M07938_2.00 Known CisBP GGGGAGGGCGCGCGG Direct PWM Open · Scan
M09030_2.00 Known CisBP GGGGGGCGGGAAAG Direct PWM Open · Scan
M09521_2.00 Known CisBP CTGGCGGGAA Direct PWM Open · Scan
M10444_2.00 Known CisBP TACGCGCGAAAACTG Direct PWM Open · Scan
M10445_2.00 Known CisBP TTTCGCGCCAAA Direct PWM Open · Scan
E2F1_HUMAN.H11MO.0.A Known HOCOMOCO GGGGGGCGGGAAAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 437 aa
124-215

Region 124-215 0 PWM

Residues
92 aa
Domains
PF02319 · E2F/DP family winged-helix DNA-binding domain PF16421 · E2F transcription factor CC-MB domain
3D models
1 active PDB
Templates
4YO2
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 124-2151 model
Actions
Predicted = Low TFS_Q01094:124:215_4yo2_A_1 4yo2 124-215 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
129-192PF02319E2F/DP family winged-helix DNA-binding domainoverlaps 124-215
206-299PF16421E2F transcription factor CC-MB domainoverlaps 124-215