ModCRE DB

Transcription factor

Q01538 - MYT1

Myelin transcription factor 1 (MyT1) (Myelin transcription factor I) (MyTI) (PLPB1) (Proteolipid protein-binding protein)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1121 aa

4 Generated PWM 4 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE4
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_Q01538_MYT1_HUMAN:439:467_2jx1_A_1 ModCRE Homology model TGAAAAAG Region 439-467 · 1 3D model Open · Scan
TFS_sp_Q01538_MYT1_HUMAN:440:513_2mf8_A_1 ModCRE Homology model TTAAAAAGTTTTA Region 440-513 · 1 3D model Open · Scan
TFS_sp_Q01538_MYT1_HUMAN:797:871_2mf8_A_1 ModCRE Homology model TAAAACTTTTTGA Region 797-871 · 1 3D model Open · Scan
TFS_sp_Q01538_MYT1_HUMAN:841:871_2jx1_A_1 ModCRE Homology model CGCTTTTA Region 841-871 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1121 aa
439-513
797-871

Region 439-513 2 PWM

Residues
75 aa
Domains
PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type
3D models
2 active PDBs
Templates
2JX1, 2MF8
Sources
Predicted = Low
Scan this region Show models

Region 797-871 2 PWM

Residues
75 aa
Domains
PF01530 · Zinc finger, C2HC type PF01530 · Zinc finger, C2HC type
3D models
2 active PDBs · 2 summary rows
Templates
2JX1, 2MF8
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
4 active PDB models 2 summary rows
Region 439-5132 models
Actions
Predicted = Low TFS_sp_Q01538_MYT1_HUMAN:439:467_2jx1_A_1 2jx1 439-467 View model · PDB
Predicted = Low TFS_sp_Q01538_MYT1_HUMAN:440:513_2mf8_A_1 2mf8 440-513 View model · PDB
Region 797-8712 models · 2 summary rows
Actions
Predicted = Low TFS_sp_Q01538_MYT1_HUMAN:797:871_2mf8_A_1 2mf8 797-871 View model · PDB
Predicted = Low TFS_sp_Q01538_MYT1_HUMAN:841:871_2jx1_A_1 2jx1 841-871 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 2mf8 797:871 797 871 P:A · DNA:B,C 100.0% / 100.0% 100 View · PDB TFS_sp_Q01538_MYT1_HUMAN:797:871_2mf8_A_1
2 2jx1 797:871 841 871 P:A · DNA:B,C 100.0% / 100.0% 100 View · PDB TFS_sp_Q01538_MYT1_HUMAN:841:871_2jx1_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
30-57PF01530Zinc finger, C2HC typeNo overlap with loaded model regions
441-467PF01530Zinc finger, C2HC typeoverlaps 439-513
485-513PF01530Zinc finger, C2HC typeoverlaps 439-513
560-615PF08474Myelin transcription factor 1No overlap with loaded model regions
616-790PF08474Myelin transcription factor 1No overlap with loaded model regions
800-827PF01530Zinc finger, C2HC typeoverlaps 797-871
843-871PF01530Zinc finger, C2HC typeoverlaps 797-871
892-920PF01530Zinc finger, C2HC typeNo overlap with loaded model regions
946-973PF01530Zinc finger, C2HC typeNo overlap with loaded model regions