ModCRE DB

Transcription factor

Q01664 - TFAP4

Transcription factor AP-4 (Activating enhancer-binding protein 4) (Class C basic helix-loop-helix protein 41) (bHLHc41)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 338 aa

22 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known22
MotifPredictionSourceDNA bindingSupportLogoActions
MA0691.1 Known JASPAR AACAGCTGAT Direct PWM Open · Scan
MA1570.1 Known JASPAR AACATATGTT Direct PWM Open · Scan
MA1966.1 Known JASPAR GCCGGAAGCAGGTGGG Direct PWM Open · Scan
MA1966.2 Known JASPAR CCGGAAGCAGGTG Direct PWM Open · Scan
MA1967.1 Known JASPAR ACCGGAAACAGCTGAT Direct PWM Open · Scan
MA1967.2 Known JASPAR ACCGGAAACAGCTG Direct PWM Open · Scan
M02776_2.00 Known CisBP AACAGCTGAT Direct PWM Open · Scan
M02777_2.00 Known CisBP AACAGCTGAT Direct PWM Open · Scan
M04066_2.00 Known CisBP AACATATGGT Direct PWM Open · Scan
M04067_2.00 Known CisBP ATCAGCTGAT Direct PWM Open · Scan
M04068_2.00 Known CisBP AACATATGAT Direct PWM Open · Scan
M04069_2.00 Known CisBP ATCAGCTGAT Direct PWM Open · Scan
M04070_2.00 Known CisBP AACATATGTT Direct PWM Open · Scan
M04071_2.00 Known CisBP ATCAGCTGAT Direct PWM Open · Scan
M04072_2.00 Known CisBP AACATATGTT Direct PWM Open · Scan
M04073_2.00 Known CisBP ATCAGCTGAT Direct PWM Open · Scan
M08712_2.00 Known CisBP AAACAGCTGG Direct PWM Open · Scan
M09453_2.00 Known CisBP AAACAGCTGT Direct PWM Open · Scan
M09802_2.00 Known CisBP CTGACCACAGCTGACTCT Direct PWM Open · Scan
M09803_2.00 Known CisBP ACCAGCTGAG Direct PWM Open · Scan
M09806_2.00 Known CisBP ACCAGCTGAG Direct PWM Open · Scan
TFAP4_HUMAN.H11MO.0.A Known HOCOMOCO CCAGCTGTTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 338 aa
39-100

Region 39-100 0 PWM

Residues
62 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1MDY
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 39-1001 model
Actions
Predicted = Low DIMER_Q01664:39:100_1mdy_A_1 1mdy 39-100 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
49-99PF00010Helix-loop-helix DNA-binding domainoverlaps 39-100