ModCRE DB

Transcription factor

Q01892 - SPIB

Transcription factor Spi-B

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 262 aa

12 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known12
MotifPredictionSourceDNA bindingSupportLogoActions
MA0081.1 Known JASPAR AGAGGAA Direct PWM Open · Scan
MA0081.2 Known JASPAR TTTCACTTCCTCTTTT Direct PWM Open · Scan
MA0081.3 Known JASPAR TCACTTCCTCTTT Direct PWM Open · Scan
M02678_2.00 Known CisBP AGAGGAA Direct PWM Open · Scan
M03008_2.00 Known CisBP AAAAAGCGGAAGTA Direct PWM Open · Scan
M04803_2.00 Known CisBP AATGCGGAAGTG Direct PWM Open · Scan
M04804_2.00 Known CisBP AATGAGGAAGTG Direct PWM Open · Scan
M04805_2.00 Known CisBP AAAAGCGGAAGTA Direct PWM Open · Scan
M04806_2.00 Known CisBP GAAAGGGGAAGTG Direct PWM Open · Scan
M09064_2.00 Known CisBP AAAAAGAGGAAGTGAAA Direct PWM Open · Scan
M09537_2.00 Known CisBP AAAGAGGAAGTG Direct PWM Open · Scan
SPIB_HUMAN.H11MO.0.A Known HOCOMOCO AAAAAGAGGAAGTGAAA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 262 aa
168-252

Region 168-252 0 PWM

Residues
85 aa
Domains
PF00178 · Ets-domain
3D models
1 active PDB
Templates
5E8I
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 168-2521 model
Actions
Predicted = Low DIMER_Q01892:168:252_5e8i_G_1 5e8i 168-252 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
169-251PF00178Ets-domainoverlaps 168-252