ModCRE DB

Transcription factor

Q02078 - MEF2A

Myocyte-specific enhancer factor 2A (Serum response factor-like protein 1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 507 aa

16 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known16
MotifPredictionSourceDNA bindingSupportLogoActions
MA0052.1 Known JASPAR CTATTTATAG Direct PWM Open · Scan
MA0052.2 Known JASPAR AGCTAAAAATAGCAT Direct PWM Open · Scan
MA0052.3 Known JASPAR TCTAAAAATAGA Direct PWM Open · Scan
MA0052.4 Known JASPAR TTCTAAAAATAGAAA Direct PWM Open · Scan
MA0052.5 Known JASPAR CTAAAAATAG Direct PWM Open · Scan
M03340_2.00 Known CisBP TCTAAAAATAGA Direct PWM Open · Scan
M07979_2.00 Known CisBP ATGCCAAAAATAGAA Direct PWM Open · Scan
M08212_2.00 Known CisBP CTATAAATAG Direct PWM Open · Scan
M08213_2.00 Known CisBP AAAATAGC Direct PWM Open · Scan
M09247_2.00 Known CisBP GCTAAAAATAGAA Direct PWM Open · Scan
M10935_2.00 Known CisBP CTCTAAAAATAACTCT Direct PWM Open · Scan
M10936_2.00 Known CisBP TCCGGTGCTAAAAATAGCACCT Direct PWM Open · Scan
M10937_2.00 Known CisBP TGTGGTTCTAAAAATAGAACAA Direct PWM Open · Scan
M10938_2.00 Known CisBP ACTGTTACTAAAAATAGAAACT Direct PWM Open · Scan
M10943_2.00 Known CisBP AAGCTATAAATAGAAT Direct PWM Open · Scan
MEF2A_HUMAN.H11MO.0.A Known HOCOMOCO TTCTATTTTTAGC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 507 aa
2-72

Region 2-72 0 PWM

Residues
71 aa
Domains
PF00319 · SRF-type transcription factor (DNA-binding and dimerisation domain)
3D models
1 active PDB
Templates
3MU6
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 2-721 model
Actions
Predicted = Low DIMER_Q02078:2:72_3mu6_B_1 3mu6 2-72 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
10-57PF00319SRF-type transcription factor (DNA-binding and dimerisation domain)overlaps 2-72
95-153PF12347Holliday junction regulator protein family C-terminal repeatNo overlap with loaded model regions