ModCRE DB

Transcription factor

Q02080 - MEF2B

Myocyte-specific enhancer factor 2B (RSRFR2) (Serum response factor-like protein 2)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 365 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
MA0660.1 Known JASPAR GCTATAAATAGC Direct PWM Open · Scan
M03344_2.00 Known CisBP GCTATAAATAGC Direct PWM Open · Scan
M05557_2.00 Known CisBP CCAAATATGG Direct PWM Open · Scan
M05558_2.00 Known CisBP CCAAATTTGG Direct PWM Open · Scan
M05559_2.00 Known CisBP CCAAATATGGTAACA Direct PWM Open · Scan
M05560_2.00 Known CisBP CCAAATATGGTAACA Direct PWM Open · Scan
M09251_2.00 Known CisBP CCAAAAATAGCAAC Direct PWM Open · Scan
MEF2B_HUMAN.H11MO.0.A Known HOCOMOCO GTTGCTATTTTTGG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 365 aa
2-72

Region 2-72 0 PWM

Residues
71 aa
Domains
PF00319 · SRF-type transcription factor (DNA-binding and dimerisation domain)
3D models
1 active PDB
Templates
3MU6
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 2-721 model
Actions
Predicted = Low DIMER_Q02080:2:72_3mu6_B_1 3mu6 2-72 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
10-57PF00319SRF-type transcription factor (DNA-binding and dimerisation domain)overlaps 2-72