ModCRE DB

Transcription factor

Q02386 - ZNF45

Zinc finger protein 45 (BRC1744) (Zinc finger protein 13) (Zinc finger protein KOX5)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 682 aa

3 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known3
MotifPredictionSourceDNA bindingSupportLogoActions
M07579_2.00 Known CisBP CATCTCCAGGA Direct PWM Open · Scan
M08241_2.00 Known CisBP TCTGGATTTTGTTAT Direct PWM Open · Scan
M08304_2.00 Known CisBP TATATTCCT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 682 aa
273-551

Region 273-551 0 PWM

Residues
279 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 273-5511 model
Actions
Predicted = Low TFS_Q02386:273:551_5wjq_D_1 5wjq 273-551 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-48PF01352KRAB boxNo overlap with loaded model regions
192-214PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
276-298PF00096Zinc finger, C2H2 typeoverlaps 273-551
304-326PF00096Zinc finger, C2H2 typeoverlaps 273-551
332-354PF00096Zinc finger, C2H2 typeoverlaps 273-551
360-382PF00096Zinc finger, C2H2 typeoverlaps 273-551
388-410PF00096Zinc finger, C2H2 typeoverlaps 273-551
416-438PF00096Zinc finger, C2H2 typeoverlaps 273-551
444-466PF00096Zinc finger, C2H2 typeoverlaps 273-551
472-494PF00096Zinc finger, C2H2 typeoverlaps 273-551
500-522PF00096Zinc finger, C2H2 typeoverlaps 273-551
528-548PF00096Zinc finger, C2H2 typeoverlaps 273-551
556-578PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
584-606PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
612-634PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
640-662PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions