ModCRE DB

Transcription factor

Q02575 - NHLH1

Helix-loop-helix protein 1 (HEN-1) (Class A basic helix-loop-helix protein 35) (bHLHa35) (Nescient helix loop helix 1) (NSCL-1)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 133 aa

14 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known14
MotifPredictionSourceDNA bindingSupportLogoActions
MA0048.1 Known JASPAR GCGCAGCTGCGT Direct PWM Open · Scan
MA0048.2 Known JASPAR CGCAGCTGCG Direct PWM Open · Scan
MA0048.3 Known JASPAR CGCAGCTGC Direct PWM Open · Scan
MA1938.1 Known JASPAR AGCAGCTGCCGGAAGTA Direct PWM Open · Scan
MA1938.2 Known JASPAR AGCAGCTGCCGGAAGT Direct PWM Open · Scan
M02796_2.00 Known CisBP CGCAGCTGCG Direct PWM Open · Scan
M02797_2.00 Known CisBP CGCAGCTGCG Direct PWM Open · Scan
M04162_2.00 Known CisBP GGGGCGCAGCTGCGTCCC Direct PWM Open · Scan
M04163_2.00 Known CisBP GGGGATCAGCTGCGTCCC Direct PWM Open · Scan
M04164_2.00 Known CisBP GGGCCGCAGCTGCGTCCC Direct PWM Open · Scan
M04165_2.00 Known CisBP GGGGAGCAGCTGCGTCCC Direct PWM Open · Scan
M09875_2.00 Known CisBP GAGGGGCGCAGCTGCGCCCCAA Direct PWM Open · Scan
M09876_2.00 Known CisBP AGGGGACGCAGCTGCGCCCCCT Direct PWM Open · Scan
HEN1_HUMAN.H11MO.0.C Known HOCOMOCO TGGGGAGCAGCTGCGTCCCT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 133 aa
68-131

Region 68-131 0 PWM

Residues
64 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1MDY
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 68-1311 model
Actions
Predicted = Low DIMER_Q02575:68:131_1mdy_A_1 1mdy 68-131 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
77-127PF00010Helix-loop-helix DNA-binding domainoverlaps 68-131